Suponiendo que entiendo su solicitud correctamente, creo que lo que necesita es algo como esto:
SELECT "periods"."start_date",
"periods"."end_date",
SUM(CASE WHEN "balance_transactions"."created" BETWEEN "periods"."start_date" AND "periods"."end_date" THEN "balance_transactions"."fee" ELSE 0.00 END) AS period_sum
FROM "balance_transactions"
JOIN charges ON balance_transactions.source = charges.balance_id
JOIN ( SELECT '2013-12-20'::date as start_date, '2014-01-19'::date as end_date UNION ALL
SELECT '2013-12-21'::date as start_date, '2014-01-20'::date as end_date UNION ALL
SELECT '2013-12-22'::date as start_date, '2014-01-21'::date as end_date UNION ALL
SELECT '2013-12-23'::date as start_date, '2014-01-22'::date as end_date UNION ALL
SELECT '2013-12-24'::date as start_date, '2014-01-23'::date as end_date
) as periods
ON "balance_transactions"."created" BETWEEN "periods"."start_date" AND "periods"."end_date"
WHERE "balance_transactions"."account_id" = 6
AND "balance_transactions"."type" = 'charge'
AND "charges"."refunded" = false
AND "charges"."invoice" IS NOT NULL
GROUP BY "periods"."start_date", "periods"."end_date"
Esto debería devolverle todos los períodos que le interesan en un solo conjunto de resultados. Dado que la consulta se 'genera' sobre la marcha en su interfaz, puede agregar tantas filas a la parte de períodos como desee.
Editar:con algunas pruebas y errores logré que funcionara [en sqlFiddle][1] y actualicé la sintaxis anterior en consecuencia.